CDS

Accession Number TCMCG002C00802
gbkey CDS
Protein Id XP_020088924.1
Location join(5557858..5557928,5558075..5558134,5558223..5558287,5560046..5560085,5561443..5561560,5561770..5562131,5562852..5562968,5563069..5563167,5563923..5564211)
Gene LOC109710605
GeneID 109710605
Organism Ananas comosus

Protein

Length 406aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020233335.1
Definition zinc finger protein VAR3, chloroplastic-like isoform X3 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category S
Description Zinc finger domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K14651        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko05202        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map05202        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1900865        [VIEW IN EMBL-EBI]
GO:1900871        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAAGAGCTTGTTTATGGATTGAACTTCAACCCTAGCACTTCATGGCTTGGTTTGGAGCTTAATTTGAGGTTGGATTTGAAGCTTCTTAGCTTCGATTTGGACTTTGGACAAGTTCTACTTGATCTAAGGGTGCTAGAAGACTTGTGGACAACTTCGTTTGGAGAAACGAACAAGTTTGATGGGTATCCAGTAGAACCTTCCGCGGCGGGAGAGGCTAGGGTTCGTGGCAAGAGATCCCTCCCTACACAAGACATTCAAGCTGTTGTTGAGTGCGGATGTCCTAATCTCTTCCGTAAAGTGGTGAATTCAGCAAAAAGGTTGCGAGCATTTCTGCAACTTGATGAAGCTGATGTATGTAGTGCTTGCAATCTACGAGGGTCTTGTGACAAAGCATACGTTATAGCAAAGGATAATGAAGGAGCTCGAACTGTTGATGTTGTGCGTATATTGTTAAGCTATGCGGTAGACCCTGTTAGCCTCTCTGGAGAATATTCTGTCAAAGCGAATGTTCAGGAATCTGCACGCAAGCTACTGACGGAGCTTATTAAACTTAGTGACACTGCGATTGATCCGTCCCTTCCAAAACCTGCAGTGGTATCTCCCAGTCAGAAAGAACCATTCCAGAAGGTCGTAGCAAAGGAGAAGCAATCAGTTGGAAAGGGTAAGCAATCACCTGCTGTTGAAATGAAGAGGGGGGACTGGCTATGTCCTAACTGCAACTTCCTAAATTTTGCTCGAAATCTCCGTTGCCTAGAATGCAAAGAGAATGGCCCAAAGAGAGTAGACTTTGGAAATGCTGAAATGAAGTTGGGGGATTGGACTTGTCCTGAATGTCAGTTCATGAATTTTGCTCGCAATAAGAAGTGTTTCCGTTGCCTTGAACCTCGACCTAAAAGGCCACTTAACCCTGGGGAGTGGGAATGCCCCTCATGTGATTATTTGAACTTCAGGAGAAACAAGGTTTGCCTGAAGTGCAACTGCAACCGCCCTGAAGAGGAGGGAAGTCAAGATCAGACTGAAGACCATGTATGGAGAAGGCCCAAAGAGTCCAAAAATAACACCACTTTCAAGTTTGGAGACGACGAGGATGAAGAGGAGGAAGATGATTTGGATGATATCTTGCCTCTCGAAGGAGAGCGCAAGTTTGTGGTGAGCAAAAGAGCTACTCCGGCGGAGAGGAGATCGACTTCTGCTAGAAGGCAGAATTATTCATCATGA
Protein:  
MKELVYGLNFNPSTSWLGLELNLRLDLKLLSFDLDFGQVLLDLRVLEDLWTTSFGETNKFDGYPVEPSAAGEARVRGKRSLPTQDIQAVVECGCPNLFRKVVNSAKRLRAFLQLDEADVCSACNLRGSCDKAYVIAKDNEGARTVDVVRILLSYAVDPVSLSGEYSVKANVQESARKLLTELIKLSDTAIDPSLPKPAVVSPSQKEPFQKVVAKEKQSVGKGKQSPAVEMKRGDWLCPNCNFLNFARNLRCLECKENGPKRVDFGNAEMKLGDWTCPECQFMNFARNKKCFRCLEPRPKRPLNPGEWECPSCDYLNFRRNKVCLKCNCNRPEEEGSQDQTEDHVWRRPKESKNNTTFKFGDDEDEEEEDDLDDILPLEGERKFVVSKRATPAERRSTSARRQNYSS